MSstatsConvert

Import Data from Various Mass Spectrometry Signal Processing Tools to MSstats Format

Bioconductor version: 3.23 · Package version: 1.22.1

MSstatsConvert provides tools for importing reports of Mass Spectrometry data processing tools into R format suitable for statistical analysis using the MSstats and MSstatsTMT packages.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MSstatsConvert")

Details

Maintainer	Anthony Wu <wu.anthon@northeastern.edu>
Author	Mateusz Staniak [aut], Devon Kohler [aut], Anthony Wu [aut, cre], Meena Choi [aut], Ting Huang [aut], Olga Vitek [aut]
License	Artistic-2.0
Downloads rank	806
Source branch	RELEASE_3_23
biocViews	DataImport, MassSpectrometry, Proteomics, QualityControl, Software

Documentation

Working with MSstatsConvert

Download

Source package

Dependencies

Depends: R (>= 4.0)

Imports: data.table, methods, checkmate, utils, stringi, Rcpp, parallel

LinkingTo: Rcpp

Suggests: tinytest, covr, knitr, arrow, rmarkdown

Reverse dependencies

Imports Me (6): MSstats, MSstatsBig, MSstatsLiP, MSstatsPTM, MSstatsShiny, MSstatsTMT

Suggests Me (1): MSstatsBioNet