MGnifyR

R interface to EBI MGnify metagenomics resource

Bioconductor version: 3.23 · Package version: 1.8.0

Utility package to facilitate integration and analysis of EBI MGnify data in R. The package can be used to import microbial data for instance into TreeSummarizedExperiment (TreeSE). In TreeSE format, the data is directly compatible with miaverse framework.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MGnifyR")