MEAT

Muscle Epigenetic Age Test

Bioconductor version: 3.23 · Package version: 1.24.0

This package estimates epigenetic age in skeletal muscle, using DNA methylation data generated with the Illumina Infinium technology (HM27, HM450 and HMEPIC).

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MEAT")

Details

Maintainer	Sarah Voisin <sarah.voisin.aeris@gmail.com>
Author	Sarah Voisin [aut, cre] (<https://orcid.org/0000-0002-4074-7083>), Steve Horvath [ctb] (<https://orcid.org/0000-0002-4110-3589>)
License	MIT + file LICENSE
URL	https://github.com/sarah-voisin/MEAT
Bug Reports	https://github.com/sarah-voisin/MEAT/issues
Downloads rank	331
Source branch	RELEASE_3_23
biocViews	BiomedicalInformatics, DNAMethylation, Epigenetics, MethylationArray, Microarray, Normalization, Preprocessing, Software

Documentation

MEAT (Muscle Epigenetic Age Test)

Download

Source package

Dependencies

Depends: R (>= 4.0)

Imports: impute (>= 1.58), dynamicTreeCut (>= 1.63), glmnet (>= 2.0), grDevices, graphics, stats, utils, stringr, tibble, RPMM (>= 1.25), minfi (>= 1.30), dplyr, SummarizedExperiment, wateRmelon

Suggests: knitr, markdown, rmarkdown, BiocStyle, testthat (>= 2.1.0)