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MACSQuantifyR

Fast treatment of MACSQuantify FACS data

Bioconductor version: 3.23 · Package version: 1.26.0

Automatically process the metadata of MACSQuantify FACS sorter. It runs multiple modules: i) imports of raw file and graphical selection of duplicates in well plate, ii) computes statistics on data and iii) can compute combination index.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MACSQuantifyR")

Details

MaintainerRaphaël Bonnet <raphael.bonnet@univ-cotedazur.fr>
AuthorRaphaël Bonnet [aut, cre], Marielle Nebout [dtc],Giulia Biondani [dtc], Jean-François Peyron[aut,ths], Inserm [fnd]
LicenseArtistic-2.0
Downloads rank208
Source branchRELEASE_3_23
biocViewsDataImport, DataRepresentation, FlowCytometry, GUI, Normalization, Preprocessing, Software

Documentation

Download

Dependencies

Imports: readxl, graphics, tools, utils, grDevices, ggplot2, ggrepel, methods, stats, latticeExtra, lattice, rmarkdown, png, grid, gridExtra, prettydoc, rvest, xml2

Suggests: knitr, testthat, R.utils, spelling