Lheuristic
Detection of scatterplots with L-shaped pattern
Bioconductor version: 3.23 · Package version: 1.4.0
The Lheuristic package identifies scatterpots that follow and L-shaped, negative distribution. It can be used to identify genes regulated by methylation by integration of an expression and a methylation array. The package uses two different methods to detect expression and methyaltion L- shapped scatterplots. The parameters can be changed to detect other scatterplot patterns.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Lheuristic") Details
| Maintainer | Sanchez Pla Alex <asanchez@ub.edu> |
| Author | Sanchez Pla Alex [aut, cre] (ORCID: <https://orcid.org/0000-0002-8673-7737>), Miro Cau Berta [aut] (ORCID: <https://orcid.org/0000-0001-6049-8697>) |
| License | MIT + file LICENSE |
| URL | https://github.com/ASPresearch/Lheuristic |
| Bug Reports | https://github.com/ASPresearch/Lheuristic/issues |
| Downloads rank | 131 |
| Source branch | RELEASE_3_23 |
| biocViews | DNAMethylation, MethylationArray, Software, StatisticalMethod |
Documentation
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Dependencies
Depends: R (>= 4.4.0)
Imports: Hmisc, stats, energy, grDevices, graphics, utils, MultiAssayExperiment, ggplot2, ggpubr
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)