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LRcellTypeMarkers

Marker gene information for LRcell R Bioconductor package

Bioconductor version: 3.23 · Package version: 1.20.0

This is an external ExperimentData package for LRcell. This data package contains the gene enrichment scores calculated from scRNA-seq dataset which indicates the gene enrichment of each cell type in certain brain region. LRcell package is used to identify specific sub-cell types that drives the changes observed in a bulk RNA-seq differential gene expression experiment. For more details, please visit: https://github.com/marvinquiet/LRcell.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("LRcellTypeMarkers")

Details

MaintainerWenjing Ma <wenjing.ma@emory.edu>
AuthorWenjing Ma [cre, aut] (ORCID: <https://orcid.org/0000-0001-8757-651X>)
LicenseMIT + file LICENSE
Bug Reportshttps://github.com/marvinquiet/LRcellTypeMarkers/issues
Downloads rank103
Source branchRELEASE_3_23
biocViewsExperimentData, ExperimentHub, ExpressionData, PackageTypeData, RNASeqData, SingleCellData

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Dependencies

Depends: R (>= 4.1)

Imports: ExperimentHub

Suggests: LRcell, BiocStyle, knitr, rmarkdown, roxygen2, testthat

Reverse dependencies

Suggests Me (1): LRcell