KEGGREST
Client-side REST access to the Kyoto Encyclopedia of Genes and Genomes (KEGG)
Bioconductor version: 3.23 · Package version: 1.52.2
A package that provides a client interface to the Kyoto Encyclopedia of Genes and Genomes (KEGG) REST API. Only for academic use by academic users belonging to academic institutions (see <https://www.kegg.jp/kegg/rest/>). Note that KEGGREST is based on KEGGSOAP by J. Zhang, R. Gentleman, and Marc Carlson, and KEGG (python package) by Aurelien Mazurie.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("KEGGREST") Details
| Maintainer | Bioconductor Package Maintainer <maintainer@bioconductor.org> |
| Author | Dan Tenenbaum [aut], Bioconductor Package Maintainer [aut, cre], Martin Morgan [ctb], Kozo Nishida [ctb], Marcel Ramos [ctb], Kristina Riemer [ctb], Lori Shepherd [ctb], Jeremy Volkening [ctb] |
| License | Artistic-2.0 |
| URL | https://bioconductor.org/packages/KEGGREST |
| Bug Reports | https://github.com/Bioconductor/KEGGREST/issues |
| Downloads rank | 43796 |
| Source branch | RELEASE_3_23 |
| biocViews | Annotation, KEGG, Pathways, Software, ThirdPartyClient |
Documentation
Download
Dependencies
Depends: R (>= 3.5.0)
Imports: methods, httr, png, Biostrings
Suggests: RUnit, BiocGenerics, BiocStyle, knitr, markdown
Reverse dependencies
Depends On Me (1): ROntoTools
Imports Me (28): ADAM, adSplit, AnnotationDbi, attract, BiocSet, ChIPpeakAnno, CNEr, EnrichmentBrowser, famat, FELLA, funOmics, gage, ginmappeR, KEGGlincs, MetaboDynamics, MetaboSignal, MWASTools, NoRCE, PADOG, pairkat, pathview, RnaSeqSampleSize, SBGNview, SMITE, terapadog, transomics2cytoscape, WayFindR, YAPSA
Suggests Me (22): anansi, CALANGO, Category, categoryCompare, dmGsea, gatom, GenomicRanges, ggpicrust2, globaltest, Hiiragi2013, iSEEu, maGUI, MetMashR, MLP, padma, phoenics, ReporterScore, rGREAT, RTopper, scDiffCom, SomaScan.db, ume