JASPAR2022
Data package for JASPAR database (version 2022)
Bioconductor version: 3.23 · Package version: 0.99.8
JASPAR is an open-access database containing manually curated, non-redundant transcription factor (TF) binding profiles for TFs across six taxonomic groups. In this 9th release, we expanded the CORE collection with 341 new profiles (148 for plants, 101 for vertebrates, 85 for urochordates, and 7 for insects), which corresponds to a 19% expansion over the previous release. To search thisdatabases, please use the package TFBSTools (>= 1.31.2).
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("JASPAR2022") Details
| Maintainer | Damir Baranasic <damir.baranasic@lms.mrc.ac.uk> |
| Author | Damir Baranasic [aut, cre] (<https://orcid.org/0000-0001-5948-0932>) |
| License | GPL-2 |
| URL | http://jaspar.genereg.net/ |
| Downloads rank | 447 |
| Source branch | RELEASE_3_23 |
| biocViews | AnnotationData, AnnotationHub, FunctionalAnnotation |
Download
Dependencies
Depends: R (>= 4.1.0), methods, BiocFileCache, utils
Suggests: knitr, rmarkdown, BiocStyle, TFBSTools (>= 1.31.2)
Reverse dependencies
Suggests Me (1): GRaNIE