InteractiveComplexHeatmap
Make Interactive Complex Heatmaps
Bioconductor version: 3.23 · Package version: 1.20.0
This package can easily make heatmaps which are produced by the ComplexHeatmap package into interactive applications. It provides two types of interactivities: 1. on the interactive graphics device, and 2. on a Shiny app. It also provides functions for integrating the interactive heatmap widgets for more complex Shiny app development.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("InteractiveComplexHeatmap") Details
| Maintainer | Zuguang Gu <guzuguang@suat-sz.edu.cn> |
| Author | Zuguang Gu [aut, cre] (ORCID: <https://orcid.org/0000-0002-7395-8709>) |
| License | MIT + file LICENSE |
| URL | https://github.com/jokergoo/InteractiveComplexHeatmap |
| Bug Reports | https://github.com/jokergoo/InteractiveComplexHeatmap/issues |
| Downloads rank | 698 |
| Source branch | RELEASE_3_23 |
| biocViews | Sequencing, Software, Visualization |
Documentation
Download
Dependencies
Depends: R (>= 4.0.0), ComplexHeatmap (>= 2.11.0)
Imports: grDevices, stats, shiny, grid, GetoptLong, S4Vectors (>= 0.26.1), digest, IRanges, kableExtra (>= 1.3.1), utils, svglite, htmltools, clisymbols, jsonlite, RColorBrewer, fontawesome
Suggests: knitr, rmarkdown, testthat, EnrichedHeatmap, GenomicRanges, data.table, circlize, GenomicFeatures, tidyverse, tidyHeatmap, cluster, org.Hs.eg.db, simplifyEnrichment, GO.db, SC3, GOexpress, SingleCellExperiment, scater, gplots, pheatmap, airway, DESeq2, DT, cola, BiocManager, gridtext, HilbertCurve (>= 1.21.1), shinydashboard, SummarizedExperiment, pkgndep, ks
Reverse dependencies
Imports Me (4): CRISPRball, gINTomics, goatea, mineSweepR
Suggests Me (5): CTexploreR, dtGAP, metasnf, simona, simplifyEnrichment