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IMAS

Integrative analysis of Multi-omics data for Alternative Splicing

Bioconductor version: 3.23 · Package version: 1.36.0

Integrative analysis of Multi-omics data for Alternative splicing.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("IMAS")

Details

MaintainerSeonggyun Han <hangost@ssu.ac.kr>
AuthorSeonggyun Han, Younghee Lee
LicenseGPL-2
StatusDeprecated
Downloads rank272
Source branchRELEASE_3_23
biocViewsAlternativeSplicing, DifferentialExpression, DifferentialSplicing, GeneExpression, GeneRegulation, ImmunoOncology, RNASeq, Regression, SNP, Sequencing, Software, Transcription

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Dependencies

Depends: R (> 3.0.0), GenomicFeatures, ggplot2, IVAS

Imports: doParallel, lme4, BiocGenerics, GenomicRanges, IRanges, foreach, AnnotationDbi, S4Vectors, Seqinfo, stats, ggfortify, grDevices, methods, Matrix, utils, graphics, gridExtra, grid, lattice, Rsamtools, survival, BiocParallel, GenomicAlignments, parallel

Suggests: BiocStyle, RUnit