HubPub
Utilities to create and use Bioconductor Hubs
Bioconductor version: 3.23 · Package version: 1.20.2
HubPub provides users with functionality to help with the Bioconductor Hub structures. The package provides the ability to create a skeleton of a Hub style package that the user can then populate with the necessary information. There are also functions to help add resources to the Hub package metadata files as well as publish data to the Bioconductor S3 bucket.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("HubPub") Details
| Maintainer | Kayla Interdonato <kayla.morrell16@gmail.com> |
| Author | Kayla Interdonato [aut, cre], Martin Morgan [aut], Lori Shepherd [ctb] |
| License | Artistic-2.0 |
| Bug Reports | https://github.com/Bioconductor/HubPub/issues |
| Downloads rank | 708 |
| Source branch | RELEASE_3_23 |
| biocViews | DataImport, Infrastructure, Software, ThirdPartyClient |
Documentation
- Creating A Hub Package: ExperimentHub or AnnotationHub
- HubPub: Help with publication of Hub packages
Download
Dependencies
Imports: available, usethis, biocthis, dplyr, aws.s3, fs, BiocManager, utils
Suggests: AnnotationHubData, ExperimentHubData, GenomeInfoDbData, testthat, knitr, rmarkdown, BiocStyle
Reverse dependencies
Suggests Me (4): AnnotationHub, AnnotationHubData, ExperimentHub, ExperimentHubData