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HubPub

Utilities to create and use Bioconductor Hubs

Bioconductor version: 3.23 · Package version: 1.20.2

HubPub provides users with functionality to help with the Bioconductor Hub structures. The package provides the ability to create a skeleton of a Hub style package that the user can then populate with the necessary information. There are also functions to help add resources to the Hub package metadata files as well as publish data to the Bioconductor S3 bucket.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("HubPub")

Details

MaintainerKayla Interdonato <kayla.morrell16@gmail.com>
AuthorKayla Interdonato [aut, cre], Martin Morgan [aut], Lori Shepherd [ctb]
LicenseArtistic-2.0
Bug Reportshttps://github.com/Bioconductor/HubPub/issues
Downloads rank708
Source branchRELEASE_3_23
biocViewsDataImport, Infrastructure, Software, ThirdPartyClient

Documentation

Download

Dependencies

Imports: available, usethis, biocthis, dplyr, aws.s3, fs, BiocManager, utils

Suggests: AnnotationHubData, ExperimentHubData, GenomeInfoDbData, testthat, knitr, rmarkdown, BiocStyle

Reverse dependencies

Suggests Me (4): AnnotationHub, AnnotationHubData, ExperimentHub, ExperimentHubData