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HighlyReplicatedRNASeq

Collection of Bulk RNA-Seq Experiments With Many Replicates

Bioconductor version: 3.23 · Package version: 1.24.0

Gene-level count matrix data for bulk RNA-seq dataset with many replicates. The data are provided as easy to use SummarizedExperiment objects. The source data that is made accessible through this package comes from https://github.com/bartongroup/profDGE48.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("HighlyReplicatedRNASeq")

Details

MaintainerConstantin Ahlmann-Eltze <artjom31415@googlemail.com>
AuthorConstantin Ahlmann-Eltze [aut, cre] (ORCID: <https://orcid.org/0000-0002-3762-068X>)
LicenseMIT + file LICENSE
URLhttps://github.com/const-ae/HighlyReplicatedRNASeq
Bug Reportshttps://github.com/const-ae/HighlyReplicatedRNASeq/issues
Downloads rank109
Source branchRELEASE_3_23
biocViewsExperimentData, ExperimentHub, ExpressionData, RNASeqData, SequencingData

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Dependencies

Depends: SummarizedExperiment, ExperimentHub

Imports: S4Vectors

Suggests: BiocStyle, BiocFileCache, knitr, rmarkdown