GenomicInteractionNodes

A R/Bioconductor package to detect the interaction nodes from HiC/HiChIP/HiCAR data

Bioconductor version: 3.23 · Package version: 1.16.0

The GenomicInteractionNodes package can import interactions from bedpe file and define the interaction nodes, the genomic interaction sites with multiple interaction loops. The interaction nodes is a binding platform regulates one or multiple genes. The detected interaction nodes will be annotated for downstream validation.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GenomicInteractionNodes")