Bioc2026 Registration Open!

GSE159526

Placental cell DNA methylation data from GEO accession GSE159526

Bioconductor version: 3.23 · Package version: 1.18.0

19 term and 9 first trimester placental chorionic villi and matched cell-sorted samples ran on Illumina HumanMethylationEPIC DNA methylation microarrays. This data was made available on GEO accession [GSE159526](https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE159526). Both the raw and processed data has been made available on \code{ExperimentHub}. Raw unprocessed data formatted as an RGChannelSet object for integration and normalization using minfi and other existing Bioconductor packages. Processed normalized data is also available as a DNA methylation \code{matrix}, with a corresponding phenotype information as a \code{data.frame} object.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GSE159526")

Details

MaintainerVictor Yuan <victor.2wy@gmail.com>
AuthorVictor Yuan [aut, cre] (ORCID: <https://orcid.org/0000-0002-3394-998X>)
LicenseMIT + file LICENSE
URLhttps://github.com/wvictor14/GSE159526
Bug Reportshttps://github.com/wvictor14/GSE159526/issues
Downloads rank97
Source branchRELEASE_3_23
biocViewsExperimentData, ExperimentHub, GEO, Genome, Homo_sapiens_Data, MethylationArrayData, Tissue

Download

Dependencies

Suggests: ExperimentHub, BiocStyle, RefManageR, knitr, rmarkdown, testthat, minfi, tibble, sessioninfo