GSAR

Gene Set Analysis in R

Bioconductor version: 3.23 · Package version: 1.46.0

Gene set analysis using specific alternative hypotheses. Tests for differential expression, scale and net correlation structure.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GSAR")

Maintainer	Yasir Rahmatallah <yrahmatallah@uams.edu>, Galina Glazko <gvglazko@uams.edu>
Author	Yasir Rahmatallah <yrahmatallah@uams.edu>, Galina Glazko <gvglazko@uams.edu>
License	GPL (>=2)
Downloads rank	410
Source branch	RELEASE_3_23
biocViews	DifferentialExpression, Software, StatisticalMethod

Dependencies

Depends: R (>= 3.0.1), igraph (>= 0.7.1)

Imports: stats, graphics

Suggests: MASS, GSVAdata, ALL, tweeDEseqCountData, GSEABase, annotate, org.Hs.eg.db, Biobase, genefilter, hgu95av2.db, edgeR, BiocStyle