FuseSOM

A Correlation Based Multiview Self Organizing Maps Clustering For IMC Datasets

Bioconductor version: 3.23 · Package version: 1.14.0

A correlation-based multiview self-organizing map for the characterization of cell types in highly multiplexed in situ imaging cytometry assays (`FuseSOM`) is a tool for unsupervised clustering. `FuseSOM` is robust and achieves high accuracy by combining a `Self Organizing Map` architecture and a `Multiview` integration of correlation based metrics. This allows FuseSOM to cluster highly multiplexed in situ imaging cytometry assays.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("FuseSOM")