FinfoMDS
Multidimensional Scaling with F-ratio for microbiome visualization
Bioconductor version: 3.23 · Package version: 1.2.0
F-informed MDS is a new multidimensional scaling-based ordination method that configures data distribution based on the F-statistic (i.e., the ratio of dispersion between groups with shared or differing labels).
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("FinfoMDS") Details
| Maintainer | Soobin Kim <soob.kim00@gmail.com> |
| Author | Soobin Kim [aut, cre], Hyungseok Kim [aut] |
| License | GPL-3 |
| URL | https://github.com/soob-kim/FinfoMDS |
| Bug Reports | https://github.com/soob-kim/FinfoMDS/issues |
| Downloads rank | 106 |
| Source branch | RELEASE_3_23 |
| biocViews | DimensionReduction, Microbiome, MultidimensionalScaling, Software, Visualization |
Documentation
Download
Dependencies
Depends: R (>= 4.4.0)
Imports: phyloseq
Suggests: testthat (>= 3.0.0), knitr, rmarkdown, BiocStyle