Bioc2026 Registration Open!

DropletTestFiles

Test Files for Single-Cell Droplet Utilities

Bioconductor version: 3.23 · Package version: 1.22.0

Assorted files generated from droplet-based single-cell protocols, to be used for testing functions in DropletUtils. Primarily intended for storing files that directly come out of processing pipelines like 10X Genomics' CellRanger software, prior to the formation of a SingleCellExperiment object. Unlike other packages, this is not designed to provide objects that are immediately ready for analysis.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("DropletTestFiles")

Details

MaintainerAaron Lun <infinite.monkeys.with.keyboards@gmail.com>
AuthorAaron Lun [ctb, cre]
LicenseGPL-3
Downloads rank473
Source branchRELEASE_3_23
biocViewsExperimentData, ExperimentHub, ExpressionData, RNASeqData, SequencingData, SingleCellData

Download

Dependencies

Imports: utils, ExperimentHub, AnnotationHub, S4Vectors

Suggests: BiocStyle, knitr, rmarkdown, testthat, DropletUtils

Reverse dependencies

Suggests Me (2): DropletUtils, TENxIO