DNAZooData
DNA Zoo data package
Bioconductor version: 3.23 · Package version: 1.12.0
DNAZooData is a data package giving programmatic access to genome assemblies and Hi-C contact matrices uniformly processed by the [DNA Zoo Consortium](https://www.dnazoo.org/). The matrices are available in the multi-resolution `.hic` format. A URL to corrected genome assemblies in `.fastq` format is also provided to the end-user.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("DNAZooData") Details
| Maintainer | Jacques Serizay <jacquesserizay@gmail.com> |
| Author | Jacques Serizay [aut, cre] |
| License | MIT + file LICENSE |
| URL | https://github.com/js2264/DNAZooData |
| Bug Reports | https://github.com/js2264/DNAZooData/issues |
| Downloads rank | 107 |
| Source branch | RELEASE_3_23 |
| biocViews | ExperimentData, SequencingData |
Download
Dependencies
Depends: R (>= 4.2), HiCExperiment
Imports: BiocFileCache, S4Vectors, rjson, utils, tools
Suggests: dplyr, testthat, methods, BiocStyle, knitr, rmarkdown