Bioc2026 Registration Open!

DNAZooData

DNA Zoo data package

Bioconductor version: 3.23 · Package version: 1.12.0

DNAZooData is a data package giving programmatic access to genome assemblies and Hi-C contact matrices uniformly processed by the [DNA Zoo Consortium](https://www.dnazoo.org/). The matrices are available in the multi-resolution `.hic` format. A URL to corrected genome assemblies in `.fastq` format is also provided to the end-user.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("DNAZooData")

Details

MaintainerJacques Serizay <jacquesserizay@gmail.com>
AuthorJacques Serizay [aut, cre]
LicenseMIT + file LICENSE
URLhttps://github.com/js2264/DNAZooData
Bug Reportshttps://github.com/js2264/DNAZooData/issues
Downloads rank107
Source branchRELEASE_3_23
biocViewsExperimentData, SequencingData

Download

Dependencies

Depends: R (>= 4.2), HiCExperiment

Imports: BiocFileCache, S4Vectors, rjson, utils, tools

Suggests: dplyr, testthat, methods, BiocStyle, knitr, rmarkdown