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DMRsegaldata

Example DNAm Data for DMRsegal

Bioconductor version: 3.23 · Package version: 1.0.0

Data package providing example DNA methylation files used in the DMRsegal vignette and examples. Includes a sorted beta matrix as a tab-delimited, bgzip-compressed file and a matching phenotype table. The data contains 10 healthy and 10 cancer samples, and preprocessing has already been performed on the beta values.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("DMRsegaldata")

Details

MaintainerVasileios Lemonidis <vasileios.lemonidis@uantwerpen.be>
AuthorVasileios Lemonidis [aut, cre, cph] (ORCID: <https://orcid.org/0000-0002-6446-3536>), Center for Oncological Research, University of Antwerp [cph, fnd], Stichting Tegen Kanker [fnd]
LicenseGPL (>= 2)
URLhttps://github.com/CMG-UA/DMRsegal
Bug Reportshttps://github.com/CMG-UA/DMRsegal/issues
Downloads rank27
Source branchRELEASE_3_23
biocViewsExperimentData, ExperimentHub, Genome, MicroarrayData, SNPData, SequencingData

Download

Dependencies

Depends: R (>= 4.5.0), ExperimentHub

Suggests: knitr, rmarkdown, BiocStyle, ExperimentHubData