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CardinalIO

Read and write mass spectrometry imaging files

Bioconductor version: 3.23 · Package version: 1.10.0

Fast and efficient reading and writing of mass spectrometry imaging data files. Supports imzML and Analyze 7.5 formats. Provides ontologies for mass spectrometry imaging.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("CardinalIO")

Details

MaintainerKylie Ariel Bemis <k.bemis@northeastern.edu>
AuthorKylie Ariel Bemis [aut, cre]
LicenseArtistic-2.0 | file LICENSE
URLhttp://www.cardinalmsi.org
Bug Reportshttps://github.com/kuwisdelu/CardinalIO/issues
Downloads rank330
Source branchRELEASE_3_23
biocViewsDataImport, ImagingMassSpectrometry, Infrastructure, MassSpectrometry, Software

Documentation

Download

Dependencies

Depends: R (>= 4.4), BiocParallel, matter, ontologyIndex

Imports: methods, S4Vectors, stats, utils, tools

Suggests: BiocStyle, testthat, knitr, rmarkdown

Reverse dependencies

Imports Me (1): Cardinal