CalibraCurve
Calibration curves for targeted proteomics, lipidomics and metabolomics data
Bioconductor version: 3.23 · Package version: 1.2.0
CalibraCurve is a computational tool designed to generate calibration curves for targeted mass spectrometry-based quantitative data. It is applicable to various omics disciplines, including proteomics, lipidomics, and metabolomics. The package also offers functionalities for data and calibration curve visualization and concentration prediction from new datasets based on the established curves.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("CalibraCurve") Details
| Maintainer | Karin Schork <karin.schork@rub.de> |
| Author | Karin Schork [aut, cre] (ORCID: <https://orcid.org/0000-0003-3756-4347>), Robin Grugel [aut], Michael Kohl [aut], Markus Stepath [aut], Martin Eisenacher [aut, fnd] |
| License | BSD 3-clause License + file LICENSE |
| URL | https://github.com/mpc-bioinformatics/CalibraCurve |
| Bug Reports | https://github.com/mpc-bioinformatics/CalibraCurve/issues |
| Downloads rank | 122 |
| Source branch | RELEASE_3_23 |
| biocViews | Lipidomics, MassSpectrometry, Metabolomics, Proteomics, Regression, Software, Visualization |
Documentation
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Dependencies
Depends: R (>= 4.5.0)
Imports: checkmate, dplyr, ggplot2, magrittr, openxlsx, scales, SummarizedExperiment, tidyr
Suggests: BiocStyle, knitr, msqc1, RefManageR, rmarkdown, sessioninfo, testthat, vdiffr