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CENTREannotation

Hub package for the annotation data of CENTRE (GENCODE v40 and SCREEN v3)

Bioconductor version: 3.23 · Package version: 0.99.1

This is an AnnotationHub package for the CENTRE Bioconductor software package. It contains the GENCODE version 40 annotation and ENCODE Registry of candidate cis-regulatory elements (cCREs) version 3. All for Human hg38 genome.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("CENTREannotation")

Details

MaintainerSara Lopez Ruiz de Vargas <lopez_s@molgen.mpg.de>
AuthorSara Lopez Ruiz de Vargas [aut, cre] (ORCID: <https://orcid.org/0000-0002-1290-4774>)
LicenseArtistic-2.0
URLhttps://github.com/slrvv/CENTREannotation
Bug Reportshttps://github.com/slrvv/CENTREannotation/issues
Downloads rank31
Source branchRELEASE_3_23
biocViewsAnnotationData, AnnotationHub

Download

Dependencies

Depends: R (>= 4.5.0)

Imports: AnnotationHub, RSQLite, DBI, BiocGenerics, methods

Suggests: knitr, rmarkdown, testthat, BiocStyle