BiocSet
Representing Different Biological Sets
Bioconductor version: 3.23 · Package version: 1.26.0
BiocSet displays different biological sets in a triple tibble format. These three tibbles are `element`, `set`, and `elementset`. The user has the abilty to activate one of these three tibbles to perform common functions from the dplyr package. Mapping functionality and accessing web references for elements/sets are also available in BiocSet.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BiocSet")Details
| Maintainer | Kayla Morrell <kayla.morrell16@gmail.com> |
| Author | Kayla Morrell [aut, cre], Martin Morgan [aut], Kevin Rue-Albrecht [ctb], Lluís Revilla Sancho [ctb] |
| License | Artistic-2.0 |
| Downloads rank | 631 |
| Source branch | RELEASE_3_23 |
| biocViews | GO, GeneExpression, KEGG, Software |
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Dependencies
Depends: R (>= 3.6), dplyr
Imports: methods, tibble, utils, rlang, plyr, S4Vectors, BiocIO, AnnotationDbi, KEGGREST, ontologyIndex, tidyr
Suggests: GSEABase, airway, org.Hs.eg.db, DESeq2, limma, BiocFileCache, GO.db, testthat, knitr, rmarkdown, BiocStyle