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ArrayExpress

Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Bioconductor version: 3.23 · Package version: 1.72.0

Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ArrayExpress")

Details

MaintainerJose Marugan <jcmarca@ebi.ac.uk>
AuthorAudrey Kauffmann, Ibrahim Emam, Michael Schubert, Jose Marugan
LicenseArtistic-2.0
Downloads rank719
Source branchRELEASE_3_23
biocViewsDataImport, Microarray, OneChannel, Software, TwoChannel

Documentation

Download

Dependencies

Depends: R (>= 2.9.0), Biobase (>= 2.4.0)

Imports: oligo, limma, httr, utils, jsonlite, rlang, tools, methods

Suggests: affy

Reverse dependencies

Depends On Me (1): DrugVsDisease

Suggests Me (1): bapred