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AnVILPublish

Publish Packages and Other Resources to AnVIL Workspaces

Bioconductor version: 3.23 · Package version: 1.22.0

Use this package to create or update AnVIL workspaces from resources such as R / Bioconductor packages. The metadata about the package (e.g., select information from the package DESCRIPTION file and from vignette YAML headings) are used to populate the 'DASHBOARD'. Vignettes are translated to python notebooks ready for evaluation in AnVIL.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AnVILPublish")

Details

MaintainerMarcel Ramos <marcel.ramos@sph.cuny.edu>
AuthorMarcel Ramos [aut, cre] (ORCID: <https://orcid.org/0000-0002-3242-0582>), Martin Morgan [aut] (ORCID: <https://orcid.org/0000-0002-5874-8148>), Kayla Interdonato [aut], Vincent Carey [ctb] (ORCID: <https://orcid.org/0000-0003-4046-0063>)
LicenseArtistic-2.0
Downloads rank210
Source branchRELEASE_3_23
biocViewsInfrastructure, Software

Documentation

Download

Dependencies

Imports: AnVIL, AnVILGCP, BiocBaseUtils, BiocManager, httr, jsonlite, rmarkdown, yaml, readr, whisker, tools, utils, stats

Suggests: knitr, BiocStyle, GCPtools, testthat (>= 3.0.0)

Reverse dependencies

Imports Me (1): BiocAzul