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AHPubMedDbs

SQLites, tibbles, and data.tables for AnnotationHub

Bioconductor version: 3.23 · Package version: 1.8.0

Supplies AnnotationHub with some preprocessed sqlite, tibble, and data.table datasets of PubMed. All the datasets are generated by our Snakemake workflow [pubmed-workflow](https://github.com/rikenbit/pubmed-workflow). For the details, see the README.md of pubmed-workflow.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AHPubMedDbs")

Details

MaintainerKoki Tsuyuzaki <k.t.the-answer@hotmail.co.jp>
AuthorKoki Tsuyuzaki [aut, cre], Manabu Ishii [aut], Itoshi Nikaido [aut]
LicenseArtistic-2.0
Bug Reportshttps://github.com/rikenbit/AHPubMedDbs/issues
Downloads rank39
Source branchRELEASE_3_23
biocViewsAnnotationData, AnnotationHub

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Dependencies

Depends: R (>= 4.1.0)

Imports: AnnotationHub (>= 2.22.0)

Suggests: BiocStyle, knitr, rmarkdown