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AHLRBaseDbs

LRBaseDbs for AnnotationHub

Bioconductor version: 3.23 · Package version: 1.8.0

Supplies AnnotationHub with `LRbaseDb` Ligand-Receptor annotation databases for many species. All the SQLite files are generated by our Snakemake workflow [lrbase-workflow](https://github.com/rikenbit/lrbase-workflow). For the details, see the README.md of lrbase-workflow.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AHLRBaseDbs")

Details

MaintainerKoki Tsuyuzaki <k.t.the-answer@hotmail.co.jp>
AuthorKoki Tsuyuzaki [aut, cre], Manabu Ishii [aut], Itoshi Nikaido [aut]
LicenseArtistic-2.0
Bug Reportshttps://github.com/rikenbit/AHLRBaseDbs/issues
Downloads rank43
Source branchRELEASE_3_23
biocViewsAnnotationData, AnnotationHub, FunctionalAnnotation, LRBaseDb

Download

Dependencies

Depends: R (>= 4.1.0)

Imports: AnnotationHub (>= 2.22.0)

Suggests: BiocStyle, knitr, rmarkdown