Slides

• 2012-07-02-Carey-reproducible-workflows.pdf
• 2012-07-02-Gatto-Quick-Package.pdf
• 2012-07-02-Gatto-R-Basics.pdf
• 2012-07-02-Gentleman-Bioconductor.pdf
• 2012-07-02-Huber-Microarrays.pdf
• 2012-07-02-Morgan-bioc-for-seq-analysis.pdf
• 2012-07-03-Anders-Sequencing-alignment.pdf
• 2012-07-03-Carey-ranges.pdf
• 2012-07-03-Morgan-reads-sequences-alignments.pdf
• 2012-07-04-Anders-DESeq-DEXSeq.pdf
• 2012-07-04-Gentleman-Statistics-intro.pdf
• 2012-07-04-Huber-Multiple-testing-independent-filtering.pdf
• 2012-07-05-Morgan-annotation.pdf
• 2012-07-06-Gentleman-GSEA.pdf
• 2012-07-06-Gentleman-Variant-calling.pdf
• 2012-07-06-Huber-Machine-learning.pdf
• 2012-07-06-Morgan-motifs.pdf
• 2012-07-06-Morgan-splice-graphs.pdf
• BioCOverview2012.ppt
• Statistics101.ppt
• EpigenomicsBrixen_Computational.pptx.pdf
• EpigenomicsBrixen_Intro.pptx.pdf

Install the package for Friday's lab, using R-2.15, as follows:

source("http://bioconductor.org/scratch-repos/pkgInstall.R")
pkgInstall("ReadsAlignmentsVariantsLab")